NP_001141628.3 has 431 amino acids
Query: DUF295 [M=259]
Accession: PF03478.22
Description: Domain of unknown function (DUF295)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.2e-29 88.1 0.4 4.2e-29 88.1 0.4 1.7 2 NP_001141628.3
Domain annotation for each sequence (and alignments):
>> NP_001141628.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.6 0.0 0.093 0.093 60 104 .. 10 55 .. 4 105 .. 0.64
2 ! 88.1 0.4 4.2e-29 4.2e-29 35 247 .. 161 381 .. 121 403 .. 0.75
Alignments for each domain:
== domain 1 score: -1.6 bits; conditional E-value: 0.093
DUF295 60 npltgarieLPplstlpve...ellirkvvlsaspssdyvvvlisges 104
+p +LP+ p + +r+v++ +sps+++ +l+s +s
NP_001141628.3 10 HPRQARLLPLPSPGV-P-SpleSNTLREVAVAESPSKKICHALSSTPS 55
555555566775532.2.023344677777777777555555555544 PP
== domain 2 score: 88.1 bits; conditional E-value: 4.2e-29
DUF295 35 rrrcvgssggwLltaderssnlfllnpltgarieLPplstlpve..ellirkvvlsasps..sdyvvvlisgesggklafcrsgdssWttieeeg 125
r++g+s g+L++ + + ++ l+n+ +ga+++ P+l+ + + + +++ + + a+ + +++++ ++ ++ ++ ++ g++ W+ ++
NP_001141628.3 161 YMRYLGCSYGYLIFSNLE--QCLLVNVYSGATVRPPKLK-FT-DnrN-VYHGALV-APINlsNSCLLFCS----RSSIFQWKVGSDFWSEHPLGV 245
4569*********99874..5*************99995.32.3323.6666666.43345367776543....358**************9888 PP
DUF295 126 egyedvvfhkgkfYaltntgevvvldl.gsdeplevsevvks......kerkylVessGelllVrrylkk....eskrtvefeVykldlee.eak 208
e+++++v +kg+++a++ ++++ ++l + + +ev+ v+++ +++++lV + + ll+V+ ++ +f+V++ld++ +ak
NP_001141628.3 246 ECISQIVSFKGEIFAIDLLRRLHRIQLePQLSLQEVAVVWDAdmflglDSTQWLVVCGDMLLMVHLSVTIdspcS-GFSETFNVCRLDFQVePAK 339
899************************855556666666666889987558999966667888874444489963.44589********96689* PP
DUF295 209 weevesLgdralFlgsns...sfsvsasdfpglkgNcIYftd 247
w++v+++gd+alF+g++ +fs+ + g k+NcIY +
NP_001141628.3 340 WVKVDNMGDNALFVGTDGrspTFSCLGPEKWGGKRNCIYIAS 381
**************99886656777777777********964 PP
Or compare NP_001141628.3 to CDD or PaperBLAST