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Align NP_001143742.2 to PF03478 (DUF295)

NP_001143742.2 has 382 amino acids

Query:       DUF295  [M=259]
Accession:   PF03478.22
Description: Domain of unknown function (DUF295)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-39  122.7   0.0    1.8e-39  122.0   0.0    1.3  1  NP_001143742.2  


Domain annotation for each sequence (and alignments):
>> NP_001143742.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.0   1.8e-39   1.8e-39       1     250 [.      52     331 ..      52     351 .. 0.75

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 1.8e-39
          DUF295   1 lPwlllpddeeedsstlfs.lpdgklyrrlklPegrrrcvgssg.gwLltaderssnlfllnpltgarieLPplst..lpve.....ellirkvv 86 
                     lP l+lp+++    s +++ l+  +  ++  lP  r  ++gs++ gw+++a  ++++ +l+n  tg   eLP + +  +        ++++  + 
  NP_001143742.2  52 LPSLFLPPAN---VSGVYCyLSG-CRDHN-MLPGPR--YFGSYDgGWFFLAYGQTRGHRLFNIRTGGSHELPDVVAdlF--TtvgtySMVVLAAT 137
                     6888888863...4554442444.21224.478875..9*****9****9988777899*************8832223..24445555666666 PP

          DUF295  87 lsasps.sdyvvvlisges.......ggklafcrsgds..sWttieee....gegyedvvfhkgkfYaltntgevvvldl.........gsdepl 158
                     ls +p    +v++ i   +       ++++af+r+gd+    +++++e    g + edvv+++  fY+lt++g++ v            g     
  NP_001143742.2 138 LSLPPDhLACVAAGIVTYQpdldaprRRHVAFWRPGDKmaVCNVVPNEsvgpGLEPEDVVYYRDSFYFLTQDGHILVSRPyynrvgdilG----- 227
                     666675677777777666678*****99********9963355555559*9844568********************9976665433321..... PP

          DUF295 159 evs.....evvks............kerkylVessGelllVrrylkkeskrtvefeVykldleeeakweevesLgdralFlgsnssfsvsasdfp 236
                       +     +                 + +ylV+s+Gell+V+r  ++++  t++f+V+++ l  ++ w e + L +r+lF+g+++s s ++s++p
  NP_001143742.2 228 --AlskltR---FqfqeggcsdeqfVRARYLVSSRGELLMVVRLAAHHHAPTSSFKVFRMTLY-PRTWFEEDALCGRMLFVGRGCSRSYEVSQYP 316
                     ..1222330...13444666655554478*****************9999***********98.679**************************** PP

          DUF295 237 glkgNcIYftddk..k 250
                     g+k   I+f+dd+  +
  NP_001143742.2 317 GFKD-GIFFLDDRsfY 331
                     **96.8*****98431 PP



Or compare NP_001143742.2 to CDD or PaperBLAST