NP_001152652.1 has 273 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-26 77.0 0.2 1.2e-25 76.4 0.2 1.3 1 NP_001152652.1
Domain annotation for each sequence (and alignments):
>> NP_001152652.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 76.4 0.2 1.2e-25 1.2e-25 1 115 [. 82 195 .. 82 197 .. 0.90
Alignments for each domain:
== domain 1 score: 76.4 bits; conditional E-value: 1.2e-25
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89
r +vl+++ G di+++++ f+r++ r+++vls++Gav+n+tl+ g l g+fEils+sG ++p g l+v+la+
NP_001152652.1 82 RSHVLEIASGADIVDAIAGFSRRR-QRGVSVLSGTGAVTNVTLREPAGAGGA-AAVALRGRFEILSMSGAFLPapappgATG-----LTVYLAGG 169
68**********************.*****************7777666665.4777789*************777766446.....******** PP
PCC 90 dgqvvgGhlveglvaattvevviaef 115
+gqvvgG ++ +l+a+++v v++a+f
NP_001152652.1 170 QGQVVGGSVMGELIASGPVMVIAATF 195
**********66***********998 PP
Or compare NP_001152652.1 to CDD or PaperBLAST