NP_001159201.1 has 341 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.5e-24 70.4 0.0 1.2e-23 69.9 0.0 1.3 1 NP_001159201.1
Domain annotation for each sequence (and alignments):
>> NP_001159201.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 69.9 0.0 1.2e-23 1.2e-23 1 115 [. 138 249 .. 138 251 .. 0.91
Alignments for each domain:
== domain 1 score: 69.9 bits; conditional E-value: 1.2e-23
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89
r +vl++++G+d+++s++ far++ ++cvls+ G+v+n+ v ++ +l g+fEilsl G+++p g l+v+l++
NP_001159201.1 138 RAHVLEVAAGCDVVDSVAGFARRR-QVGVCVLSGAGSVANVC---VRQPGAGAGAVTLPGRFEILSLCGSFLPppappaATG-----LTVYLSGG 223
68**********************.99***************...88888888899*****************776666445.....******** PP
PCC 90 dgqvvgGhlveg.lvaattvevviaef 115
+gqvvgG ++ g l a+++v +v+a f
NP_001159201.1 224 QGQVVGGSVA-GpLLASGPVVIVAACF 249
**********.77*********98765 PP
Or compare NP_001159201.1 to CDD or PaperBLAST