NP_181070.1 has 285 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-27 81.5 0.1 4.1e-27 81.1 0.1 1.2 1 NP_181070.1
Domain annotation for each sequence (and alignments):
>> NP_181070.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 81.1 0.1 4.1e-27 4.1e-27 1 116 [. 106 218 .. 106 219 .. 0.92
Alignments for each domain:
== domain 1 score: 81.1 bits; conditional E-value: 4.1e-27
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladedgq 92
r ++l++ G+d++e++ ++ar++ r++cvls++G+v+n++ + +++ +l g+fEilslsG+++p l++ la+++gq
NP_181070.1 106 RAHILEVGSGCDVFECISTYARRR-QRGICVLSGTGTVTNVS---IRQPTAAGAVVTLRGTFEILSLSGSFLPppappgA-----TSLTIFLAGAQGQ 194
68**********************.*****************...77777888889*****************7765442.....56*********** PP
PCC 93 vvgGhlveglvaattvevviaefe 116
vvgG +v +l+aa++v v++a+f+
NP_181070.1 195 VVGGNVVGELMAAGPVMVMAASFT 218
*******66*************97 PP
Or compare NP_181070.1 to CDD or PaperBLAST