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Align NP_182067.1 to PF03479 (PCC)

NP_182067.1 has 317 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.6e-27   80.4   0.0    1.1e-26   79.8   0.0    1.3  1  NP_182067.1  


Domain annotation for each sequence (and alignments):
>> NP_182067.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   1.1e-26   1.1e-26       2     115 ..     118     232 ..     117     234 .. 0.88

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 1.1e-26
          PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlgl.vdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladedgq 92 
                   +v+++++G+d++es++ far++  r++cvls++Gav+n+t++  ++ +       +l g+fEilslsG+++p        g     l+++la+ +gq
  NP_182067.1 118 SHVMEVANGCDVMESVTVFARRR-QRGICVLSGNGAVTNVTIRQpASVPGGGSSVVNLHGRFEILSLSGSFLPppappaASG-----LTIYLAGGQGQ 209
                  79*********************.*****************765244555555688889**************776666556.....*********** PP

          PCC  93 vvgGhlveg.lvaattvevviaef 115
                  vvgG +v g l+a+++v +++a+f
  NP_182067.1 210 VVGGSVV-GpLMASGPVVIMAASF 232
                  *******.77***********998 PP



Or compare NP_182067.1 to CDD or PaperBLAST