VIMSS10090427 has 351 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-28 83.9 0.1 8e-28 83.4 0.1 1.2 1 VIMSS10090427
Domain annotation for each sequence (and alignments):
>> VIMSS10090427
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.4 0.1 8e-28 8e-28 2 115 .. 165 278 .. 164 280 .. 0.93
Alignments for each domain:
== domain 1 score: 83.4 bits; conditional E-value: 8e-28
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88
++vl++ +Ged+ ++++++ ++ +ra+cvlsa+Ga+sn+t + +++++ + +++g+fEilslsG++ + t+g l+vsl+
VIMSS10090427 165 PHVLTVLAGEDVSSKIMALTHNG-PRAVCVLSANGAISNVT---LRQSATSGGTVTYEGRFEILSLSGSFHLlenngqrsrTGG-----LSVSLSS 251
8********************99.*****************...66666777789****************9999888888888.....******* PP
PCC 89 edgqvvgGhlveg.lvaattvevviaef 115
+dg+v+gG ++ g l+aa++v++v+++f
VIMSS10090427 252 PDGNVLGGSVA-GlLIAASPVQIVVGSF 278
***********.77************98 PP
Or compare VIMSS10090427 to CDD or PaperBLAST