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Align VIMSS10090786 to PF03479 (PCC)

VIMSS10090786 has 574 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-21   63.3   0.3    2.5e-21   62.5   0.3    1.5  1  VIMSS10090786  


Domain annotation for each sequence (and alignments):
>> VIMSS10090786  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   0.3   2.5e-21   2.5e-21       2     115 ..     107     222 ..     106     224 .. 0.90

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 2.5e-21
            PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp..........tdgepflHlhvsla 87 
                    ++ +++++Gedi++++++f ++   r+++vls++Gav+n+t   +  + ++ + +++++++Ei+sl+ + +           t+g     + ++++
  VIMSS10090786 107 PHSFTVNKGEDIIKRIMSFTANG-SRGISVLSVNGAVANVT---ILPHGSSRRVMTFKEEYEIVSLTNNTMAisesggvknkTGG-----WRITIG 193
                    7999*****************99.*****************...44555666699**************9999****99998888.....999999 PP

            PCC  88 d.edgqvvgGhlveglvaattvevviaef 115
                    + + g+v+gG l+  l+aa++v+vvi++f
  VIMSS10090786 194 GaAGGRVHGGALAGSLIAASPVQVVIGSF 222
                    96579********66************99 PP



Or compare VIMSS10090786 to CDD or PaperBLAST