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Align VIMSS10091849 to PF03479 (PCC)

VIMSS10091849 has 348 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.1e-26   76.9   0.0    1.3e-25   76.3   0.0    1.3  1  VIMSS10091849  


Domain annotation for each sequence (and alignments):
>> VIMSS10091849  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.0   1.3e-25   1.3e-25       2     115 ..     164     277 ..     163     279 .. 0.90

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 1.3e-25
            PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88 
                    ++v+ ++ Gedi++++ +f+++  +ra+cvlsa+Gavs at   + +++ +   ++++g+fEil+ls +++          t       l+vsla 
  VIMSS10091849 164 PHVIAVSIGEDIASKVIAFSQQG-PRAICVLSASGAVSTAT---LIQPSASPGAIKYEGRFEILALSTSYIVatdgsfrnrT-----GNLSVSLAS 250
                    8**********************.*****************...5566666689999*************999666666544.....45******* PP

            PCC  89 edgqvvgGhlveg.lvaattvevviaef 115
                    +dg+v+gG +  g l+aa++v+v++++f
  VIMSS10091849 251 PDGRVIGGAIG-GpLIAASPVQVIVGSF 277
                    ***********.77************98 PP



Or compare VIMSS10091849 to CDD or PaperBLAST