VIMSS10097918 has 310 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-25 75.9 0.3 2.4e-25 75.4 0.3 1.2 1 VIMSS10097918
Domain annotation for each sequence (and alignments):
>> VIMSS10097918
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 75.4 0.3 2.4e-25 2.4e-25 2 115 .. 117 228 .. 116 230 .. 0.93
Alignments for each domain:
== domain 1 score: 75.4 bits; conditional E-value: 2.4e-25
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdge..pflHlhvsladedgqvvg 95
+vl++++G d++esl++far++ r+++vls++G v+n+t + +++ + +l g+fEils+ G ++pt g+ ++ l+++la+++gqvvg
VIMSS10097918 117 SHVLEIATGADVAESLNAFARRR-GRGVSVLSGSGLVTNVT---LRQPAASGGVVSLRGQFEILSMCGAFLPTSGSpaAAAGLTIYLAGAQGQVVG 208
79*********************.*****************...7777777778999***************8888778889************** PP
PCC 96 Ghlveg.lvaattvevviaef 115
G ++ g l+a+++v v++a+f
VIMSS10097918 209 GGVA-GpLIASGPVIVIAATF 228
****.77**********9988 PP
Or compare VIMSS10097918 to CDD or PaperBLAST