VIMSS1100470 has 140 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-29 88.7 0.1 2.2e-29 88.4 0.1 1.1 1 VIMSS1100470
Domain annotation for each sequence (and alignments):
>> VIMSS1100470
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.4 0.1 2.2e-29 2.2e-29 2 113 .. 9 118 .. 8 121 .. 0.96
Alignments for each domain:
== domain 1 score: 88.4 bits; conditional E-value: 2.2e-29
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdgepflHlhvsladedgqvvgGhl 98
++++rle G++++++l+ +a++ + + + s+iGa++++t+++++ ++++y e++ ++++E+lslsG++ + dg+++ Hlh+s+a+ d +v+gGhl
VIMSS1100470 9 QIICRLEVGDELITELKYLAATLPDQLGAI-SGIGACNDVTVSIYSPDSDSYVETRSQEQVELLSLSGNVENADGKISTHLHASFARLDTSVFGGHL 104
6899*******************9999999.****************************************************************** PP
PCC 99 veglvaattvevvia 113
++++ + t e+vi
VIMSS1100470 105 ERAVI-SRTGELVIS 118
*8888.*******97 PP
Or compare VIMSS1100470 to CDD or PaperBLAST