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Align VIMSS88078 to PF03479 (PCC)

VIMSS88078 has 94 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-19   57.0   0.0    1.4e-19   56.8   0.0    1.1  1  VIMSS88078  


Domain annotation for each sequence (and alignments):
>> VIMSS88078  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   1.4e-19   1.4e-19      44     116 ..       2      74 ..       1      75 [. 0.92

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 1.4e-19
         PCC  44 glvdgeekeyeekellgpfEilslsGtisp.tdgepflHlhvsladedgqvvgGhlveglvaattvevviaefe 116
                 g++d ++k+y+++ +++++E+ls+ G++++  dg+p+lH+h +l+ +dg++ gGhl++++v  +t+ev ++e +
  VIMSS88078   2 GWFDPNAKTYRKIPIDEQCEVLSAIGDVALgDDGKPSLHVHTVLGLSDGTTRGGHLLQAMV-RPTLEVTLVEAP 74 
                 79****************************55555**********************7777.********9976 PP



Or compare VIMSS88078 to CDD or PaperBLAST