XP_003590926.1 has 329 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.8e-25 74.1 0.3 1.3e-24 73.0 0.1 1.7 2 XP_003590926.1
Domain annotation for each sequence (and alignments):
>> XP_003590926.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 73.0 0.1 1.3e-24 1.3e-24 2 115 .. 111 222 .. 110 223 .. 0.93
2 ? -3.8 0.0 0.85 0.85 87 97 .. 269 279 .. 266 281 .. 0.81
Alignments for each domain:
== domain 1 score: 73.0 bits; conditional E-value: 1.3e-24
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladed 90
+++++++pGedi + ++ ++++++ ++c+lsa+G++s+at + +++++ +++++g+f i+sl+G++++ ++g l+v+l+ +d
XP_003590926.1 111 IHFVTVAPGEDIGQNIMMLMQKNSRCEMCILSASGSISSAT---LRQPATSGGNITYEGRFDIISLTGSYVRneldgrSGG-----LSVCLSHSD 197
799**************************************...7788888889******************887777666.....********* PP
PCC 91 gqvvgGhlveg.lvaattvevviaef 115
gq vgG ++ g l+aa++v+v++++f
XP_003590926.1 198 GQLVGGSIA-GpLKAASPVQVIAGTF 222
*********.77***********998 PP
== domain 2 score: -3.8 bits; conditional E-value: 0.85
PCC 87 adedgqvvgGh 97
+++++qv+gG
XP_003590926.1 269 GNKEHQVIGGS 279
67889999995 PP
Or compare XP_003590926.1 to CDD or PaperBLAST