VIMSS1087 has 263 amino acids
Query: UPF0014 [M=242]
Accession: PF03649.17
Description: Uncharacterised protein family (UPF0014)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-85 271.9 17.8 2.5e-85 271.7 17.8 1.0 1 VIMSS1087
Domain annotation for each sequence (and alignments):
>> VIMSS1087
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 271.7 17.8 2.5e-85 2.5e-85 2 242 .] 10 255 .. 9 255 .. 0.97
Alignments for each domain:
== domain 1 score: 271.7 bits; conditional E-value: 2.5e-85
UPF0014 2 lqlalalllvlialllslvlklglekelliaavravvQLllvGyvLklifalnnlllvllillvmiliAaieaakrvkkrlkgllk.....ivllsllvs 96
+ql+ a+++v++ +l+ +++++ eke+l+a++r++ QL++ G+vL++i+++ ++l+++l +lvm ++A+++++kr++ +l+ +k +++s+ ++
VIMSS1087 10 IQLLSAYIFVVVLMLILRIRRIPREKEVLVASIRMTFQLVMAGFVLSYILDHPSPLYTILAVLVMEIFAIYNVYKRARLSLPARVKkrlelFIAISVSTG 109
79***************************************************************************87777666655546889999999 PP
UPF0014 97 tllvllllllliiqpepwyepqylIPiaGmilGnamnaislalerllselkeereeiealLalGatpkeAvaeilreavraaliPtinsmktvGlVsLPG 196
tll l+++l+++++ +pw++p+y+IP+aGmi+Gn+m+++sl++++l ++++ +++ +ea+L+lGa pk+Av+ + ++a+++a++Pt+nsm +G+V+LPG
VIMSS1087 110 TLLSLVYFLYVVVRISPWFDPRYVIPLAGMIIGNSMTGVSLGVKTLSESITIQKDIVEAALMLGARPKDAVRMFSDRAFDSAILPTLNSMIGMGIVFLPG 209
9*************************************************************************************************** PP
UPF0014 197 mmtGqiLaGaspleAvkyqilimfmilastaltsllvvllvyrrlf 242
mmtGqiL+Gasp++A+kyqi+im+ il+ +++++ ++++l+y+ +f
VIMSS1087 210 MMTGQILSGASPITAIKYQIAIMLGILGEVTISVSVFLYLGYKAFF 255
*******************************************998 PP
Or compare VIMSS1087 to CDD or PaperBLAST