VIMSS3345721 has 252 amino acids
Query: UPF0014 [M=242]
Accession: PF03649.17
Description: Uncharacterised protein family (UPF0014)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-42 131.4 30.3 2e-42 131.3 30.3 1.0 1 VIMSS3345721
Domain annotation for each sequence (and alignments):
>> VIMSS3345721
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 131.3 30.3 2e-42 2e-42 4 239 .. 13 241 .. 10 244 .. 0.93
Alignments for each domain:
== domain 1 score: 131.3 bits; conditional E-value: 2e-42
UPF0014 4 lalalllvlialllslvlklglekelliaavravvQLllvGyvLklifalnnlllvllillvmiliAaieaakrvkkrlkgllkivllsllvstllv 100
+++++++vl ++++ +v +g ++ +a++r vvQL++v+ vL + +a +l+ ++l+l+ m+++A+++aakr++ + +++ +l+v+ + v
VIMSS3345721 13 VSVCVVMVLASAAVYRVAAIGSVWTVPWASLRGVVQLAAVAGVLVAAMA--RLWSSALVLAGMFVVAGVTAAKRIGASRGA--AWAVGALAVGWVSV 105
568899**************************************98887..7**********************8776555..55677777777777 PP
UPF0014 101 llllllliiqpepwyepqylIPiaGmilGnamnaislalerllselkeereeiealLalGatpkeAvaeilreavraaliPtinsmktvGlVsLPGm 197
l lll+ +++++++ ++Pia+++lGnam++is+a + l+++ ++ e+ea+L+lG++++++ ++++ ++l+Pt++s++tvGlV+LPG+
VIMSS3345721 106 LPLLLV---SGAVPLTGVAVVPIAAIVLGNAMTSISVAARLALDAIAARAGEVEAALSLGMSQRDSRMGVIDQVAATSLLPTVDSTRTVGLVTLPGA 199
766666...8899************************************************************************************ PP
UPF0014 198 mtGqiLaGaspleAvkyqilimfmilastaltsllvvllvyr 239
++G++L+ s +A+++qili++++l s++ ++ +++ l++r
VIMSS3345721 200 FVGVLLSTGSAAQAAAVQILILIALLLSQTCAVAVTIELIAR 241
************************************999987 PP
Or compare VIMSS3345721 to CDD or PaperBLAST