PaperBLAST – Find papers about a protein or its homologs

 

Align WP_025033060.1 to PF03653 (UPF0093)

WP_025033060.1 has 144 amino acids

Query:       UPF0093  [M=146]
Accession:   PF03653.17
Description: Uncharacterised protein family (UPF0093)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-65  205.6   9.0    2.5e-65  205.4   9.0    1.0  1  WP_025033060.1  


Domain annotation for each sequence (and alignments):
>> WP_025033060.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.4   9.0   2.5e-65   2.5e-65       3     146 .]       4     144 .]       2     144 .] 0.97

  Alignments for each domain:
  == domain 1  score: 205.4 bits;  conditional E-value: 2.5e-65
         UPF0093   3 alylwvkalHiiavisWmAglfyLPRlfVyhaeakekseekellkimerrLlkvimnpamivtlvlGllllvlaeglvalssgWlhvKlllvlll 97 
                     ++ylw+kalH+iavisWmAg++yLPRlfVyh+ea+ +s+++e++kimerrLlk+i+npam vt+++G l+l++   +  +s gWlhvKl+lvl+l
  WP_025033060.1   4 DVYLWIKALHVIAVISWMAGMLYLPRLFVYHCEAEIGSKQSETFKIMERRLLKAIINPAMTVTWLAG-LYLAWSGHW--FSFGWLHVKLALVLVL 95 
                     79*****************************************************************.999998855..778************* PP

         UPF0093  98 lifhlvlakllkklergentksekfyrilNEvptlllivivllvvvkpf 146
                     +++h+++++++k+++++++ +s+kfyri+NEvpt+l+iviv++v+vkpf
  WP_025033060.1  96 SAVHGFFSRWVKDFAADKRPRSQKFYRIINEVPTVLMIVIVIMVIVKPF 144
                     ***********************************************98 PP



Or compare WP_025033060.1 to CDD or PaperBLAST