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Align Q9CWD1 to PF03661 (TMEM33_Pom33)

Q9CWD1 has 177 amino acids

Query:       TMEM33_Pom33  [M=240]
Accession:   PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-71  224.6   7.0    7.8e-71  224.3   7.0    1.0  1  Q9CWD1    


Domain annotation for each sequence (and alignments):
>> Q9CWD1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.3   7.0   7.8e-71   7.8e-71       7     171 ..      12     176 ..       7     177 .] 0.98

  Alignments for each domain:
  == domain 1  score: 224.3 bits;  conditional E-value: 7.8e-71
  TMEM33_Pom33   7 eslkqhvvanklelalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrlpqvqlsreflqrllledschyLlysliFlfsapv 103
                   + ++q++++nkl++a+wl+rl+tv++++l++lpl++ +e+as+Y++allana+tsalrLhqrlp++qlsr+fl+++lledschyLlysliF++s+pv
        Q9CWD1  12 AGAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPV 108
                   5689********************************************************************************************* PP

  TMEM33_Pom33 104 tlallPvalfallHaasytltlldllgsnslvvarllislvesqsqniLkliAlsEivlmpllivlll 171
                   t++++Pv+lf+llHaa+yt+++ld  gsnsl++ r  ++++++++qniLk+iA++Ei+lmp+++++l+
        Q9CWD1 109 TMSIFPVLLFSLLHAATYTKKVLDAKGSNSLPLLRSFLDKLSTNQQNILKFIACNEIFLMPATVFMLF 176
                   ******************************************************************98 PP



Or compare Q9CWD1 to CDD or PaperBLAST