XP_012048108.1 has 278 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-43 133.5 4.4 6.9e-43 132.8 4.4 1.2 1 XP_012048108.1
Domain annotation for each sequence (and alignments):
>> XP_012048108.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 132.8 4.4 6.9e-43 6.9e-43 22 215 .. 9 231 .. 6 249 .. 0.91
Alignments for each domain:
== domain 1 score: 132.8 bits; conditional E-value: 6.9e-43
TMEM33_Pom33 22 lwlarlltvlftvlyil..plflssesasaYykallanaatsalrLhqrlpqvqlsreflqrllledschyLlysliFlfsapvtlallPvalfa 114
lw++ +tvlf+ +yi+ ++++ ++ ++Y+ a +++ +++ ++++++l+++qls+ +l r+l++++c+y l++l + +s+pv l++lP+a+f+
XP_012048108.1 9 LWALGHFTVLFSTVYIIfqTVLFRGTPVKTYRLAYSGALLSYFIVVYKSLGRPQLSQPWLRRALVDENCQYALLALFWWISKPVNLTVLPFATFS 103
788888999999999888999************************************************************************** PP
TMEM33_Pom33 115 llHaasytltlld................................llgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllgrasl 177
l+H +++++t + l n + r ++ +v++++ ++++++A Ei++ l+ +l++r+s+
XP_012048108.1 104 LFHCLTFLRTNIIpklvppppkpaagaapdaaapgasasqparppALLDN---ISRRIQVWVKTNYDTAMRFVAYAEIFITLRLFAGVLTFRTSF 195
**********9999******************999876554333322222...22444899********************************** PP
TMEM33_Pom33 178 ltpliYyqfLslRYsSrrnPytrnafselrilleklan 215
+t l+ +f+++RY +P tr a++++ ++++++++
XP_012048108.1 196 ITALFMIHFVRFRYH--ASPFTRSAVHDITTRIDAFVA 231
***************..***************999775 PP
Or compare XP_012048108.1 to CDD or PaperBLAST