XP_017214478.1 has 252 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-104 332.7 15.3 6.6e-104 332.6 15.3 1.0 1 XP_017214478.1
Domain annotation for each sequence (and alignments):
>> XP_017214478.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 332.6 15.3 6.6e-104 6.6e-104 4 240 .] 14 250 .. 11 250 .. 0.98
Alignments for each domain:
== domain 1 score: 332.6 bits; conditional E-value: 6.6e-104
TMEM33_Pom33 4 ksleslkqhvvanklelalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrlpqvqlsreflqrllledschyLlysliFl 98
+ ++ + q++ +nkle+a+wl+rl+tv++++++ilpl++ +++a++Y++allana+tsalrLhqrlp++qlsr+fl+++l+edschyLlysli +
XP_017214478.1 14 PPQAGAAQFLLSNKLETAMWLSRLFTVYCSIMFILPLLGPQAAANFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALQEDSCHYLLYSLILV 108
5567889**************************************************************************************** PP
TMEM33_Pom33 99 fsapvtlallPvalfallHaasytltlldllgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllgraslltpliYyqfLslRYsS 193
+s+p+t++++Pv+lf+llHa++yt+++ld++g nsl+++r +++++s++qniLk+iA++Ei+lmp+++++l++g++sll+p+iYy+fL+lRYsS
XP_017214478.1 109 NSYPITMSIFPVFLFSLLHATTYTKKVLDTMGPNSLMFVRNFLNKLTSNQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSS 203
*********************************************************************************************** PP
TMEM33_Pom33 194 rrnPytrnafselrilleklankpscPavirklieklislvsrlapp 240
rrnPy+r++f+elrille++++kpscP ++r+++ ++i++vsrlap+
XP_017214478.1 204 RRNPYCRTLFTELRILLEHFVMKPSCPVFFRRMCLNSIAFVSRLAPT 250
*********************************************95 PP
Or compare XP_017214478.1 to CDD or PaperBLAST