PaperBLAST – Find papers about a protein or its homologs

 

Align C0NQQ6 to PF03690 (UPF0160)

C0NQQ6 has 371 amino acids

Query:       UPF0160  [M=318]
Accession:   PF03690.17
Description: Uncharacterised protein family (UPF0160)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.1e-122  394.7   0.0   2.7e-122  394.4   0.0    1.1  1  C0NQQ6    


Domain annotation for each sequence (and alignments):
>> C0NQQ6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  394.4   0.0  2.7e-122  2.7e-122       1     318 []      16     370 ..      16     370 .. 0.97

  Alignments for each domain:
  == domain 1  score: 394.4 bits;  conditional E-value: 2.7e-122
  UPF0160   1 kigTHsgsFhaDevlAvalLrllpeykdaeivRtrdpevlekcdivvDVggvydpekkryDHHqrefketfsekkktklSSaGLvykhfgkeiikkllklkv 102
              +igTH+g+FhaDe+lAv+lLrllp+y+++ +vRtrdp+ l++c++vvDVgg+ydp+++ryDHHqr+f+ tf+++ +tklSSaGL+y hfgk+ii+++++l+ 
   C0NQQ6  16 TIGTHNGHFHADEALAVYLLRLLPTYTSSPLVRTRDPSLLATCHTVVDVGGEYDPSRNRYDHHQRTFTATFPQH-STKLSSAGLIYLHFGKAIIAQHTSLPP 116
              69**********************************************************************87.7************************** PP

  UPF0160 103 deeevellyeklyeefieaiDaiDnGisvyde......evepkykikt.tlssrvsrlnpswneeeseedederFekAselvgeeflekvkkyakswlpare 197
              d+++v +lyekly++fiea+Da+DnGisvyd+      +v++++++++ +l ++v++ln+   +++  +ded+ Fe+As+++g+ fl+k++ ++ swlpar+
   C0NQQ6 117 DHPDVATLYEKLYSDFIEALDANDNGISVYDNaalnaaGVRKRFRDSGiSLGALVGDLNHPDPTATGPQDEDALFENASTFIGDAFLRKLRVASASWLPARA 218
              *************************************99*********************99999************************************* PP

  UPF0160 198 ivkealekrkevdesgrilvleqs.vpwkehllelekelkie...................keilyvlyed...eskkwrvqavpvseesfesrkpLpeewr 276
              +v ea+++r+++++sgrilvl++  +pwkehl+ le+e+ ++                   ++++yvly++    ++kwrvq+vpv+++sfesr pLpe+w+
   C0NQQ6 219 TVSEAYKARFDTHASGRILVLPKAgIPWKEHLFVLEEEEAAAaaagaeaeagkiggahvdrRQVYYVLYPEstaPEAKWRVQCVPVTDTSFESRRPLPEAWC 320
              *********************8877**********988886668899999**********9********98788899************************* PP

  UPF0160 277 GlrdeeLsevsgie........gavFvhasgFiggaktkegalkmakkal 318
              G+rde+L+++   e        gavFvha+gFigg++t+ega++ma ++l
   C0NQQ6 321 GIRDEDLDKLLASEetsvvvppGAVFVHATGFIGGHATREGAFAMAVRSL 370
              *********9988888999999************************9987 PP



Or compare C0NQQ6 to CDD or PaperBLAST