PaperBLAST – Find papers about a protein or its homologs

 

Align Q641W2 to PF03690 (UPF0160)

Q641W2 has 381 amino acids

Query:       UPF0160  [M=318]
Accession:   PF03690.17
Description: Uncharacterised protein family (UPF0160)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     2e-141  457.3   0.0   2.2e-141  457.1   0.0    1.0  1  Q641W2    


Domain annotation for each sequence (and alignments):
>> Q641W2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.1   0.0  2.2e-141  2.2e-141       2     318 .]      47     366 ..      46     366 .. 0.99

  Alignments for each domain:
  == domain 1  score: 457.1 bits;  conditional E-value: 2.2e-141
  UPF0160   2 igTHsgsFhaDevlAvalLrllpeykdaeivRtrdpevlekcdivvDVggvydpekkryDHHqrefketfsek.....kktklSSaGLvykhfgkeiikkll 98 
              igTH+g+Fh+De+lA+alLrllpey++aeivRtrdpe+l+ cdivvDVgg+y+p+++ryDHHqr+f+et+s+      ++tklSSaGLvy hfg++++++ll
   Q641W2  47 IGTHNGTFHCDEALACALLRLLPEYRNAEIVRTRDPEKLALCDIVVDVGGEYNPQRHRYDHHQRTFTETMSSLcpgkpWQTKLSSAGLVYLHFGHKLLAQLL 148
              9**********************************************************************999999************************9 PP

  UPF0160  99 klkvdeeevellyeklyeefieaiDaiDnGisvydeevepkykikttlssrvsrlnpswneeeseedederFekAselvgeeflekvkkyakswlpareivk 200
               ++++++ v+++y+k+ye+f+e++Da+DnGis++  e+ep+y  +ttls+rvsrlnp+wn+   ++d+++ F++A++lv+eefl++++ y++swlpar++v+
   Q641W2 149 GTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQWA-EGEPRYALTTTLSARVSRLNPTWNQ--PDQDTEAGFRRAMDLVQEEFLQRLNFYQHSWLPARALVE 247
              999*****************************999.59**********************9..89999********************************** PP

  UPF0160 201 ealekrkevdesgrilvleqs.vpwkehllelekelkiekeilyvlyedeskkwrvqavpvseesfesrkpLpeewrGlrdeeLsevsgiegavFvhasgFi 301
              eal++r++vd+sg+i++l ++ +pwkehl++le+el+ +  i +v+y+d+ ++wrvq+vp++++sf+sr+pLpe wrGlrde+L++vsgi+g++FvhasgFi
   Q641W2 248 EALAQRFKVDSSGEIVELAKGgCPWKEHLYHLESELSPTVAITFVIYTDQAGQWRVQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFI 349
              ******************8888******************************************************************************** PP

  UPF0160 302 ggaktkegalkmakkal 318
              gg++t+egal+ma+++l
   Q641W2 350 GGHHTREGALNMARATL 366
              *************9986 PP



Or compare Q641W2 to CDD or PaperBLAST