VIMSS395 has 289 amino acids
Query: UPF0160 [M=318]
Accession: PF03690.17
Description: Uncharacterised protein family (UPF0160)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-49 154.5 0.0 1.9e-48 151.8 0.0 1.9 1 VIMSS395
Domain annotation for each sequence (and alignments):
>> VIMSS395
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 151.8 0.0 1.9e-48 1.9e-48 2 310 .. 7 275 .. 6 284 .. 0.87
Alignments for each domain:
== domain 1 score: 151.8 bits; conditional E-value: 1.9e-48
UPF0160 2 igTHsgsFhaDevlAvalLrllpeykdaeivRtrdpevlekcdivvDVggvydpekkryDHHqrefketfsekkktklSSaGLvykhf.gkeiikkllklk 101
+gTH+gsFhaDev A+alL + + +ivRtrdp++l++c+ v+DVgg y e+kr+DHHq +++ SSaG+v + g ++++
VIMSS395 7 VGTHDGSFHADEVTACALLIMFDLVDENKIVRTRDPQKLAQCEYVCDVGGRYSTEHKRFDHHQVSYTG--------SWSSAGMVLDYLhGLGFLSHD---- 95
89**************************************************************9544........358*****8764033443333.... PP
UPF0160 102 vdeeevellyeklyeefieaiDaiDnGisvydeevepkykikt.tlssrvsrlnpswneeeseedederFekAselvgeeflekvkkyakswlpareivke 201
e ye l +++++ +D DnG + + ++s++++ +np e+ ++d++F A++++ + ++ ++++ r+ivk+
VIMSS395 96 ----E----YEYLNNTLVHGVDEQDNGRFFSK--------EGFcSFSDIIKIYNP----LEEGGNTDKEFFFALRFAIDLLT-RLREKFCYDRVCRDIVKQ 175
....3....6778899***********98333........233489*********....3578999***********99655.55555788888999**99 PP
UPF0160 202 alekrkevdesgrilvleqsvpwkehllelekelkiekeilyvlyedeskkwrvqavpvse.esfesrkpLpeewrGlrdeeLsevsgiegavFvhasgFi 301
+ek ++ l +++ + w+e++++l e + + +v ++ s++w ++ +p + ++e r p+peew+Gl +++L +++gi+ga+F+h+ F+
VIMSS395 176 VMEK------ESVCLRFDRPLAWQENFFSLGGESH---PAAFVSFP-CSDQWILRGIPPTLdRRMEVRIPFPEEWAGLLGDQLVQATGIPGAIFCHKGLFL 266
9999......6889****************98888...89*****8.8*********99873789************************************ PP
UPF0160 302 ggaktkega 310
++ +++e++
VIMSS395 267 SVWDSQESC 275
998888765 PP
Or compare VIMSS395 to CDD or PaperBLAST