VIMSS756170 has 187 amino acids
Query: DUF308 [M=73]
Accession: PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-22 63.8 44.1 4.1e-14 38.9 19.0 3.1 3 VIMSS756170
Domain annotation for each sequence (and alignments):
>> VIMSS756170
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.5 17.1 1.1e-13 1.1e-13 3 72 .. 26 93 .. 24 94 .. 0.92
2 ! 38.9 19.0 4.1e-14 4.1e-14 1 72 [. 80 149 .. 80 150 .. 0.95
3 ! 11.2 13.0 1.9e-05 1.9e-05 1 46 [. 136 182 .. 136 186 .. 0.89
Alignments for each domain:
== domain 1 score: 37.5 bits; conditional E-value: 1.1e-13
DUF308 3 GilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllll 72
Gi+++ilG + l + + +l++++++G+ll+++Gi +++ f+ ++ ++g +++ l+++lyi+aG+++l
VIMSS756170 26 GIFFLILGCVGLGMVVGLTLVSMFFFGALLIIGGISHIIDVFKYKE-WKG-MIWQALIAVLYIAAGCIVL 93
9*****************************************6666.443.578999***********98 PP
== domain 2 score: 38.9 bits; conditional E-value: 4.1e-14
DUF308 1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllll 72
l+++l+i++G ++l P++a+++++ +++++l+v G+++++ afa+++++g+g +lll Gi +ii+G+l+l
VIMSS756170 80 LIAVLYIAAGCIVLYDPFLASTLITAFLAAVLIVIGLTRMIMAFALKDSKGWG--WLLLAGITAIILGILIL 149
579*****************************************999988887..7899***********98 PP
== domain 3 score: 11.2 bits; conditional E-value: 1.9e-05
DUF308 1 llGilliilGilali.wPgaallalviliGvlllvsGivqlvaafaa 46
l Gi +iilGil+l+ wP+ l ++ ++i++ l+v G + ++ a++
VIMSS756170 136 LAGITAIILGILILMqWPVSGLWIIGLFIAIELIVTGWTYIFIAISV 182
57*********998869999999999***************999865 PP
Or compare VIMSS756170 to CDD or PaperBLAST