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Align VIMSS200571 to PF04235 (DUF418)

VIMSS200571 has 399 amino acids

Query:       DUF418  [M=163]
Accession:   PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-41  127.0   7.7    3.6e-41  127.0   7.7    3.1  4  VIMSS200571  


Domain annotation for each sequence (and alignments):
>> VIMSS200571  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2     0.071     0.071      33      75 ..      44      85 ..      22     103 .. 0.62
   2 ?   -1.4   0.1      0.11      0.11      16      33 ..     110     127 ..      94     166 .. 0.65
   3 ?   -0.3   0.3     0.051     0.051      14      47 ..     153     186 ..     143     229 .. 0.46
   4 !  127.0   7.7   3.6e-41   3.6e-41       1     162 [.     233     385 ..     233     386 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.071
       DUF418 33 lllallaelaeesallslllevlsmlgglalalgYvalillll 75
                 ++  ++ +     ++  l+ ++l+ ++++++   +++l+ +l+
  VIMSS200571 44 FMG-ISFYGYAPHQIPLLWDQILQTFSNFFIEGRFISLFSMLF 85
                 333.355555566666667777777777777777777776665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.11
       DUF418  16 llrrllliglavglplal 33 
                  +l++l+++gl+ g++++ 
  VIMSS200571 110 RLKWLIIFGLIHGILIWS 127
                  445555555555554443 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.051
       DUF418  14 krllrrllliglavglplallla...llaelaeesal 47 
                  kr+ ++ ++++l+++++lal  +   +   + e++++
  VIMSS200571 153 KRKANIFIFMSLVITCLLALSGSdelF---TRESAFF 186
                  555555555555555555555552211...1111122 PP

  == domain 4  score: 127.0 bits;  conditional E-value: 3.6e-41
       DUF418   1 lgrkgllkdgeehkrllrrllliglavglplalllallaelaeesallslllevlsmlgglalalgYvalillllkkekrrrllrplaavGRmALTnY 98 
                  l+r+g++++g ++++ll+ +l+ +++ ++ + l l        ++++l++++ ++ ml+++ +al+Y+++++ +++++++  +l+pl++vG++A++ Y
  VIMSS200571 233 LYRQGIFEQGFNRNTLLKLALASLVLSTMDTLLGLT-------QNPMLVMFSDIIVMLSAIPMALIYIHILVSICQNRST--VLKPLQNVGKLAFSLY 321
                  69******7777777776666665555555555555.......**********************************888..99************** PP

       DUF418  99 llqsivctllfygyglglfgslgrlallllallifllqlllSklwlrrfrqGPlEwlwRkltyg 162
                  +lqsiv++l+f++++ +l  sl+r+ ++++al++ ++qlll++l+lr+f+qGPlE+lwR+l+++
  VIMSS200571 322 ILQSIVGVLVFRHLAPELLLSLDRWGYMAIALVYSVVQLLLASLYLRYFKQGPLEKLWRHLAFK 385
                  ************************************************************9976 PP



Or compare VIMSS200571 to CDD or PaperBLAST