VIMSS49362 has 430 amino acids
Query: DUF418 [M=163]
Accession: PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-47 146.2 16.9 4.5e-47 146.2 16.9 2.7 3 VIMSS49362
Domain annotation for each sequence (and alignments):
>> VIMSS49362
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.7 1.9 0.069 0.069 69 108 .. 89 127 .. 27 162 .. 0.65
2 ? -0.7 0.5 0.069 0.069 38 71 .. 151 184 .. 127 207 .. 0.57
3 ! 146.2 16.9 4.5e-47 4.5e-47 2 162 .. 262 418 .. 261 419 .. 0.97
Alignments for each domain:
== domain 1 score: -0.7 bits; conditional E-value: 0.069
DUF418 69 alillllkkekrrrllrplaavGRmALTnYllqsivctll 108
+l+ ll+ ++ + ++ a+vGR + +Yl s+ ++++
VIMSS49362 89 TLFSLLFGM-GFAVMSKRAADVGRAFMPFYLRRSLGLLTI 127
444444444.334467888999999999999888877776 PP
== domain 2 score: -0.7 bits; conditional E-value: 0.069
DUF418 38 laelaeesallslllevlsmlgglalalgYvali 71
l + + s+++ +++ vl +l +al+ +Y+ +
VIMSS49362 151 LLTSRRLSTAALPFTGVLLYLIPVALMSIYCWAD 184
3455556666666777777777777777776554 PP
== domain 3 score: 146.2 bits; conditional E-value: 4.5e-47
DUF418 2 grkgllkdgeehkrllrrllliglavglplallla..llaelaeesallslllevlsmlgglalalgYvalillllkkekrrrllrplaavGRmALTnY 98
+r+g++ ++e+ +rl+ +l + ++++gl+++ll++ +++++ ++ +++++ +++lsm++gl+++lgY+a+ + ++ l++ a++GRmAL+nY
VIMSS49362 262 VRSGAILQPERYRRLFAWLRWGAWPLGLTAMLLSVhlASWQDVTRVDPRAFSAFALSMIAGLLMCLGYLAWGIRAAFA------LTWAAPAGRMALSNY 354
899*********************************999*******************************99988776......67789********** PP
DUF418 99 llqsivctllfygyglglfgslgrlallllallifllqlllSklwlrrfrqGPlEwlwRkltyg 162
llqs+vctl+fygyglg+f++l+r+++l +a+++f++q++lS++wl+rfr+GP+EwlwR++ty+
VIMSS49362 355 LLQSVVCTLIFYGYGLGFFERLPRVWQLPFAIVLFTFQVALSRWWLQRFRFGPCEWLWRSFTYL 418
***************************************************************8 PP
Or compare VIMSS49362 to CDD or PaperBLAST