VIMSS900525 has 380 amino acids
Query: DUF418 [M=163]
Accession: PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.3e-50 155.1 18.4 8.3e-50 155.1 18.4 2.4 2 VIMSS900525
Domain annotation for each sequence (and alignments):
>> VIMSS900525
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.9 0.8 0.078 0.078 19 73 .. 63 119 .. 47 135 .. 0.54
2 ! 155.1 18.4 8.3e-50 8.3e-50 1 162 [. 215 374 .. 215 375 .. 0.99
Alignments for each domain:
== domain 1 score: -0.9 bits; conditional E-value: 0.078
DUF418 19 rllliglavglplallla..llaelaeesallslllevlsmlgglalalgYvalill 73
l+++++ +gl + l+ + + +ll+++ ++ + g+++la+g+v li++
VIMSS900525 63 TLFALLFGAGLQMLLPRGkqWIQSRLTLLVLLGFIHALFFWDGDILLAYGLVGLICW 119
334444445555555444222222222333333333333334667777777776655 PP
== domain 2 score: 155.1 bits; conditional E-value: 8.3e-50
DUF418 1 lgrkgllkdgeehkrllrrllliglavglplallla.llaelaeesallslllevlsmlgglalalgYvalillllkkekrrrllrplaavGRmALTn 97
l+r+g+lk g+ + r++rr+ ++++a+gl+++l+++ l+++l + ++++++ll++ ++l++++++lgY+al+ ++++ +r rl+ ++a vGRmALTn
VIMSS900525 215 LMRSGWLK-GQYSLRHYRRTGALLVALGLMINLPAViLQWRLDWAYRWCAFLLQAPRELSAPLQTLGYAALMFGFWPQLSRCRLTLAIACVGRMALTN 311
69******.***************************************************************************************** PP
DUF418 98 YllqsivctllfygyglglfgslgrlallllallifllqlllSklwlrrfrqGPlEwlwRkltyg 162
Yllq+i+ct+lf y++glf++++rl+ll++++ +++++ll+S +wlr +rqGP+EwlwR+lt +
VIMSS900525 312 YLLQTIICTTLF--YQFGLFMEFNRLELLFFVVPVWAINLLFSVIWLRFWRQGPVEWLWRQLTLR 374
************..99**********************************************975 PP
Or compare VIMSS900525 to CDD or PaperBLAST