PaperBLAST – Find papers about a protein or its homologs

 

Align WP_005916853.1 to PF04338 (DUF481)

WP_005916853.1 has 266 amino acids

Query:       DUF481  [M=210]
Accession:   PF04338.16
Description: Protein of unknown function, DUF481
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-63  200.6  13.1    1.8e-63  200.4  13.1    1.0  1  WP_005916853.1  


Domain annotation for each sequence (and alignments):
>> WP_005916853.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.4  13.1   1.8e-63   1.8e-63       2     210 .]      47     265 ..      46     265 .. 0.99

  Alignments for each domain:
  == domain 1  score: 200.4 bits;  conditional E-value: 1.8e-63
          DUF481   2 elGlslksGNtdttslnarlklkrrtgrwrhslkakany.............eekngettaenyraelqldykldeklylfgrgsyerDrfsgyd 83 
                     elG+++++GN++t+sln+r++l+++ g+w hsl+a+a++             ++++++ttae+y++++ +  +l+e+  l ++g+ye+D f++yd
  WP_005916853.1  47 ELGYAAAHGNSTTDSLNGRVRLRYTDGDWIHSLDATALRssseytntnddgsTTRERQTTAERYTGSVGSALQLGEHRQLTATGRYEHDDFATYD 141
                     8*************************************************9999999************************************** PP

          DUF481  84 lratlgaGyGyqlidtdktklsleaGpgyryekftdgpedeeeviarasldyeykisdnlkftqelealvnleggsnttlrsetgltakltdala 178
                     + at+g+GyG +lid d++ l++++Gpg+r+ + +d++++e+ +i+r+ +d++y+++dn+++ ++l +++   g+ nt++++++g+++++++++a
  WP_005916853.1 142 RLATFGIGYGTRLIDADRFYLDAQVGPGVRRAHNSDEDRNETGLIGRGLFDLKYTVTDNTDLINTLLVES---GEYNTYAQNDFGVQVSMNSHFA 233
                     **********************************************************************...********************** PP

          DUF481 179 lkisyevdydskppegkkktDttltvnLvysF 210
                     lk++++++++s++ +g+kktDt +tvnLvy+F
  WP_005916853.1 234 LKAAWQMRHNSDVSDGDKKTDTLTTVNLVYTF 265
                     *******************************9 PP



Or compare WP_005916853.1 to CDD or PaperBLAST