PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10349793 to PF04359 (DUF493)

VIMSS10349793 has 94 amino acids

Query:       DUF493  [M=84]
Accession:   PF04359.18
Description: Protein of unknown function (DUF493)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-30   91.4   0.2    2.6e-30   91.2   0.2    1.0  1  VIMSS10349793  


Domain annotation for each sequence (and alignments):
>> VIMSS10349793  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.2   0.2   2.6e-30   2.6e-30       2      84 .]      12      94 .]      11      94 .] 0.98

  Alignments for each domain:
  == domain 1  score: 91.2 bits;  conditional E-value: 2.6e-30
         DUF493  2 elleFPcdfpikviGkaeeefeeavvevverhapefdpeevevrpSskgkYvSvtvtvtveskeqldaiyraLkahervkmvL 84
                   + +eFPc+fpik++++ ++e +e +++v+e+ +p+ ++  +++++S++gkY+S+t+ +t++skeqld+iy++++ah++v+mvL
  VIMSS10349793 12 TFFEFPCQFPIKIMANPQKETVEFILSVFEKYIPNHSEIDFNTKESKTGKYISITAIFTADSKEQLDNIYKEISAHPEVHMVL 94
                   679*******************************************************************************8 PP



Or compare VIMSS10349793 to CDD or PaperBLAST