PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS271722 to PF04359 (DUF493)

VIMSS271722 has 87 amino acids

Query:       DUF493  [M=84]
Accession:   PF04359.18
Description: Protein of unknown function (DUF493)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-35  107.3   0.1    2.7e-35  107.2   0.1    1.0  1  VIMSS271722  


Domain annotation for each sequence (and alignments):
>> VIMSS271722  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   0.1   2.7e-35   2.7e-35       2      84 .]       7      87 .]       6      87 .] 0.98

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 2.7e-35
       DUF493  2 elleFPcdfpikviGkaeeefeeavvevverhap.efdpeevevrpSskgkYvSvtvtvtveskeqldaiyraLkahervkmvL 84
                 elleFPc+f++kv+G ae++++++vvevv+rhap e++p+    +pSskg+Y+Sv++t+t++  +q++++y++L + e vkmvL
  VIMSS271722  7 ELLEFPCSFTYKVMGIAEPQLVDQVVEVVQRHAPgEYTPQV---KPSSKGNYHSVSITITATHIDQVETLYEELGNLELVKMVL 87
                 79********************************9999999...***************************************8 PP



Or compare VIMSS271722 to CDD or PaperBLAST