PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS7515 to PF04363 (DUF496)

VIMSS7515 has 114 amino acids

Query:       DUF496  [M=93]
Accession:   PF04363.16
Description: Protein of unknown function (DUF496)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence  Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-42  130.3  14.1    1.5e-42  129.9  14.1    1.1  1  VIMSS7515  


Domain annotation for each sequence (and alignments):
>> VIMSS7515  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.9  14.1   1.5e-42   1.5e-42       1      92 [.       9     100 ..       9     101 .. 0.98

  Alignments for each domain:
  == domain 1  score: 129.9 bits;  conditional E-value: 1.5e-42
     DUF496   1 lenvlelvrkarrknklkreiednekkirdnqkrvellenlleyikpdmsieeikaiienmksdyedrvddyiiknaelskerrelskklke 92 
                +++vle+vr++r kn++kr++edn++kirdnqkr++ll+nl++yi++dm+i+e++ iie+m++dye rvddy+i+naelsk+rre s+k+ke
  VIMSS7515   9 FQDVLEYVRMYRLKNRIKRDMEDNNRKIRDNQKRILLLDNLNQYIRDDMTIAEVRGIIESMRDDYESRVDDYTIRNAELSKQRREASTKMKE 100
                689***************************************************************************************96 PP



Or compare VIMSS7515 to CDD or PaperBLAST