VIMSS430 has 233 amino acids
Query: DUF502 [M=106]
Accession: PF04367.17
Description: Protein of unknown function (DUF502)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-34 102.7 2.7 2.6e-33 100.4 0.2 2.1 2 VIMSS430
Domain annotation for each sequence (and alignments):
>> VIMSS430
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 2.5 0.2 0.0072 0.0072 4 34 .. 34 63 .. 30 72 .. 0.78
2 ! 100.4 0.2 2.6e-33 2.6e-33 4 106 .] 85 187 .. 81 187 .. 0.95
Alignments for each domain:
== domain 1 score: 2.5 bits; conditional E-value: 0.0072
DUF502 4 lllillvGllarnllgrkllellerlleriP 34
+ i +vG+++ n+l++ +++++ ++e+
VIMSS430 34 AITIAVVGMIM-NFLTQPFVGMVSDVFEKFS 63
45677788776.7899******999999875 PP
== domain 2 score: 100.4 bits; conditional E-value: 2.6e-33
DUF502 4 lllillvGllarnllgrkllellerlleriPlvksiYssvkqlvetllgeekksfkkvvlVeyprkglyalGFvtgeeegelaekegeelvaVfvPtspnp 104
++ ++l+G+lar ++ ++ll++ +++l+riP++k++Y++ +q++ t++g+++ sfk+vv+V +p++++ +G+v ge + +++ ++ +++Vf+Pt+pnp
VIMSS430 85 FFTTVLLGFLARLMIFKSLLSVYDKILHRIPIIKTVYKAAQQVMTTIFGSQSGSFKQVVMVPFPNREVLCIGLVAGEAPTICSRDADDPMITVFIPTTPNP 185
567899************************************************************************99777779*************** PP
DUF502 105 ts 106
ts
VIMSS430 186 TS 187
97 PP
Or compare VIMSS430 to CDD or PaperBLAST