PaperBLAST – Find papers about a protein or its homologs

 

Align WP_006251412.1 to PF04391 (DUF533)

WP_006251412.1 has 209 amino acids

Query:       DUF533  [M=178]
Accession:   PF04391.16
Description: Protein of unknown function (DUF533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-51  160.1   9.0    2.7e-51  159.8   9.0    1.1  1  WP_006251412.1  


Domain annotation for each sequence (and alignments):
>> WP_006251412.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.8   9.0   2.7e-51   2.7e-51       2     177 ..      35     206 ..      34     207 .. 0.95

  Alignments for each domain:
  == domain 1  score: 159.8 bits;  conditional E-value: 2.7e-51
          DUF533   2 lgggaaaggllglllGgkkarklggkalklGglAalgglAykayqnwqanqseaaqeeaaq.ee.eeeekaelllrAmiaAAkADGhideeErar 94 
                     +ggga+a gl+++l+G+++    g++++klG+lAa+g+lAy+ayq++qa++s+ ++ ++++ e+ +e+  ++++l+AmiaAA +DG i eeE+a 
  WP_006251412.1  35 IGGGAVAIGLISTLFGRNG----GSSLAKLGSLAAIGSLAYQAYQKYQAQNSSVSELSQNNfENvDENVASKVILQAMIAAAASDGAITEEEKAA 125
                     689****************....***************************9988888877754459999************************** PP

          DUF533  95 IvqeleelgldaeeqalleaeLakPldlaelaaav.ktpelaaevYlaSllaidedsaaEraYLdeLaeaLkLdpelvaeleqq 177
                     Iv ++++    ae+ +++++e+++P++++e+a++v ++++la++vYlaS++++ + +++E  +L++La+aL+L+++lv++le++
  WP_006251412.1 126 IVSQVGDE---AEVIEWIRQEMDTPATVEEIARQVgNDQALATQVYLASRAVCRDLERKEIVFLANLADALGLAEALVEQLEKD 206
                     *****998...7**********************************************************************86 PP



Or compare WP_006251412.1 to CDD or PaperBLAST