VIMSS218818 has 333 amino acids
Query: DUF535 [M=281]
Accession: PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-75 240.3 0.0 1.6e-75 240.0 0.0 1.0 1 VIMSS218818
Domain annotation for each sequence (and alignments):
>> VIMSS218818
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 240.0 0.0 1.6e-75 1.6e-75 3 280 .. 18 296 .. 16 297 .. 0.94
Alignments for each domain:
== domain 1 score: 240.0 bits; conditional E-value: 1.6e-75
DUF535 3 lkeakkrlkfllrsllnprqtrkllqflnqepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqegltLaeleg 100
l+ +++++k++ + + ++++++ ++q+++++ + l + +++ +++py+s++++a +rl+++ +h++ + +++a l l ++e+l+L++l++
VIMSS218818 18 LRAMHNKYKLARQIARQWPELNGFMQRMTAALGPHGLQRLGVDCIGVVQWPYISRCWEAPQRLEVVATHFERVAGQFPALL--LLGRDENLRLCDLSS 113
57899*************************************************************************777..567777******888 PP
DUF535 101 keeedfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeeeke....vvkqlTKachGlrPkrLlvealrllaqal 194
++ ++l L+ ++++EGel+L+l++++ +++sl+Ftl r++ge++l+IG++QG +k +++e ++++lTK++ GlrP++Ll+eal++l ++l
VIMSS218818 114 HSPG-CCLVLDRPIWFKREGELVLNLFQAD-LRVASLAFTLGRSQGETCLFIGAVQGIHKGIDSEtslaIYRDLTKDFEGLRPRSLLLEALKCLGRTL 209
8887.9**********************99.66**************************99997777779**************************** PP
DUF535 195 gveeilavsnkahvyralryrlkkkkklladYdefWeelggea.kkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqva 280
gv++++avs++++++r+ + +k ++l a+Yd +W+e+g++a + +++++LPl++++++ ++i+ kKRa+YrrR+alld++ ++++
VIMSS218818 210 GVTQLYAVSDACRHHRHPYFGSDKGQDLAANYDVIWQEHGATAsDREDFFSLPLAPAQRAETDIPAKKRAMYRRRQALLDDVFTRLQ 296
*****************************************7725556777******************************998876 PP
Or compare VIMSS218818 to CDD or PaperBLAST