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Align VIMSS53917 to PF04393 (DUF535)

VIMSS53917 has 306 amino acids

Query:       DUF535  [M=281]
Accession:   PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-88  281.1   0.1    5.5e-88  281.0   0.1    1.0  1  VIMSS53917  


Domain annotation for each sequence (and alignments):
>> VIMSS53917  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.0   0.1   5.5e-88   5.5e-88       3     280 ..      25     294 ..      23     295 .. 0.96

  Alignments for each domain:
  == domain 1  score: 281.0 bits;  conditional E-value: 5.5e-88
      DUF535   3 lkeakkrlkfllrsllnprqtrkllqflnqepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqegltLaelegk 101
                  k+++++++f+l+ +l+p+++ ++++ l ++p+++++ +++pr+lek+l+py++ ++  +er++ ++eh++fle+++  +ll+ +++++g++L++    
  VIMSS53917  25 VKKLRYNARFCLWGILMPDTLARIQDLL-NQPSFHPVRQHYPRTLEKPLKPYVCVKWPPQERAQRLIEHFAFLEKRHA-QLLPLIYRHQGWSLFQ---- 117
                 6899************************.99********************************************977.88899**********6.... PP

      DUF535 102 eeedfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeee..kevvkqlTKachGlrPkrLlvealrllaqalgvee 198
                  +e f+++L+  +g ++EG+laL+l ++++q+l++l+F++ +++ ++ ++IG+lQGp  + e  +e+++qlT+++hGlrPk+L++e+l +la+ + ve+
  VIMSS53917 118 -HELFSIQLC--HGPEREGSLALVLLSQDHQPLFTLAFNISGRN-KPVIHIGALQGPGPNVEnrQEIIRQLTHQLHGLRPKALIMEVLLILARYWCVEK 212
                 .999*****9..9**************************99666.**********987766666*********************************** PP

      DUF535 199 ilavsnkahvyralryrlkkkkklladYdefWeelggeakkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqva 280
                 +++v+n++hvy+alry+ +k++++ ++Y+e+W+e+ggea ++++++LP++++rk+  +++++KR+ Y +Rya+l +l+++++
  VIMSS53917 213 VYGVTNEGHVYQALRYIGSKRSSVRFQYSELWQEMGGEAINPYWHSLPTHPPRKAPLSLSKTKRRLYTKRYAWLTELEQSIQ 294
                 ******************************************9999*********************************998 PP



Or compare VIMSS53917 to CDD or PaperBLAST