PaperBLAST – Find papers about a protein or its homologs

 

Align WP_001030441.1 to PF04402 (SIMPL)

WP_001030441.1 has 236 amino acids

Query:       SIMPL  [M=200]
Accession:   PF04402.14
Description: Protein of unknown function (DUF541)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-22   67.4   4.9    1.5e-22   67.2   4.9    1.0  1  WP_001030441.1  


Domain annotation for each sequence (and alignments):
>> WP_001030441.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   4.9   1.5e-22   1.5e-22       1     200 []      38     232 ..      38     232 .. 0.75

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 1.5e-22
           SIMPL   1 ItVtGsaevevapDqatltlsvesegkdaaeakaevaekmnavlealkklgikekdi........qtsslslkpeysyengknkitgyeasqslt 87 
                     ++V G +e+ev +D+a+lt+ +  +g+ + e+  +++e+ +++++ l+++gi ek+i        +t+s++l       +++++++ y+a  s+t
  WP_001030441.1  38 VNVRGLSEKEVRADTAELTIAINFKGNVPGELFPKLEEAQKKIVAELNAQGINEKEIilgqwtskRTDSFYL-------KDDPTMPRYNADGSVT 125
                     689*********************************************99**99997455333334444555.......57788888******** PP

           SIMPL  88 vkfrdldklgevldaavka..an..eing....vsf.slsdedelrdeareeAvkdArakAealAkalgvklgkvvsisesgsnpyappapamaa 173
                     +k+++  ++++v++++ +   a+   i       +f ++    +lr+e++++A+kdAr+ A + A+ +g+++g++ + s++           +  
  WP_001030441.1 126 IKTHNVAAVEKVVAKLNELqvATdgAIAEskvaYRFnGIG---ALRAEMIAAATKDARNAALQFATDSGSQVGSISDASQG---------VFQIF 208
                     ***99999*****999774422222122112114444455...*****************************988555541.........12222 PP

           SIMPL 174 aaaaaasaatpfepgeievtasVtvvf 200
                     a+  +++++t++   + +v++  tv++
  WP_001030441.1 209 ASGSDEDDPTAIN--K-TVRVVTTVTY 232
                     2333566666655..4.8888888876 PP



Or compare WP_001030441.1 to CDD or PaperBLAST