PaperBLAST – Find papers about a protein or its homologs

 

Align WP_015732219.1 to PF04402 (SIMPL)

WP_015732219.1 has 261 amino acids

Query:       SIMPL  [M=205]
Accession:   PF04402.18
Description: Protein of unknown function (DUF541)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-34  104.7  10.7    4.8e-34  104.5  10.7    1.1  1  WP_015732219.1  


Domain annotation for each sequence (and alignments):
>> WP_015732219.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.5  10.7   4.8e-34   4.8e-34       1     205 []      48     258 ..      48     258 .. 0.87

  Alignments for each domain:
  == domain 1  score: 104.5 bits;  conditional E-value: 4.8e-34
           SIMPL   1 itVtGeaevevapDlatvtlgvetegkdaaeaqaevaervnavlaalkaaagieekdiqtsglsvspeydykngkrkitgyrasqsltvtvrdld 95 
                     i+V+++ ++++a+D  +  ++ e +gkd + +++++aer + +++ +k+   i++++++ +++ +++e++y+n kr+++gy a+qs+ +tv  + 
  WP_015732219.1  48 IEVSASETKKFAADKFEMGFSLEIRGKDKESVSKRLAERRSVIFENVKSL-EIPQSNVEQNSVEIHKEWSYRNSKRELVGYVATQSFVITV--NR 139
                     89**********************************************66.9***************************************..33 PP

           SIMPL  96 k..lgelldalveaganridgvsfslsdedelreearkeAvkdArakAealAkalgvklgrvvsise.......sgasgapppppaamaaaaaaa 181
                     k  +++l++al ++   +i+  s +l+d d+ +  ++k+A k+A akA+++A+ +g+klgrv++i+        ++ ++ +++   + aa+a+++
  WP_015732219.1 140 KidAAALVQALSSEPDVEIQRTSAQLKDVDAVQSTVIKAAGKKATAKANDYAEGVGAKLGRVLQINGegggiiyNQYNRVYRAKGVMLAANAMMD 234
                     335889998998887678************************************************96666654444445555555666666555 PP

           SIMPL 182 aaaaaatpiepgeitvsasVtvtf 205
                      aaa++++  ++ ++vsasV+v++
  WP_015732219.1 235 GAAAPDETAIADSVEVSASVRVVY 258
                     55666666667999********98 PP



Or compare WP_015732219.1 to CDD or PaperBLAST