VIMSS330623 has 241 amino acids
Query: DUF554 [M=220]
Accession: PF04474.16
Description: Protein of unknown function (DUF554)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-64 202.9 24.8 2.7e-64 202.7 24.8 1.0 1 VIMSS330623
Domain annotation for each sequence (and alignments):
>> VIMSS330623
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 202.7 24.8 2.7e-64 2.7e-64 1 220 [] 3 231 .. 3 231 .. 0.98
Alignments for each domain:
== domain 1 score: 202.7 bits; conditional E-value: 2.7e-64
DUF554 1 lGtivNvlaillGsllGlllkkrlperlketlmqalGlvvlliGismalksenlllvilslvlGaliGelldlekrlerlgeklekklkkkk...... 92
+G+i Nv+ai++G+++G+l +kr+++rlk+ l++ +G++++++Gi ++ +nl +vi+++++G+ iG l++l +++++ ++ +++ +++
VIMSS330623 3 IGIITNVCAIFFGGIVGALTGKRMSQRLKDGLNMSFGICSMCMGIYAIAPLKNLAAVIFAVIIGTGIGLLCHLGTAINHGAAAMQRFISRFVkapatf 100
79********************************************************************************9999988655689999 PP
DUF554 93 ...efaegfvtasllfcvGamailGsleeGltgdasiLltksiLDgvtaiilastlGigvlfsavpvlvyqglltllAsllkpllteeviaelsavGg 187
f +++vt+++lfc+++++i+G+l+eG++gda+iL++ksiLD+++a+i++++lG++v ++avp+l++ ++l+l+A+l+ pl+t+++i +++avGg
VIMSS330623 101 ekqAFEQTMVTVIVLFCASGTGIYGTLTEGMNGDATILISKSILDFFAAVIFGANLGLVVSLIAVPQLIILTALFLIAHLVFPLTTPDMILDFKAVGG 198
99999********************************************************************************************* PP
DUF554 188 llilaiGlnlleikkikvanllPalllavllvl 220
+l++a+G++++ +k +++a+++P +++++++++
VIMSS330623 199 ILMVASGFRIIAVKMFPTADMIPMMVVIMPISW 231
*****************************9986 PP
Or compare VIMSS330623 to CDD or PaperBLAST