REBASE::I-Bth0305I has 266 amino acids
Query: DUF559 [M=109]
Accession: PF04480.16
Description: Protein of unknown function (DUF559)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-11 29.7 0.4 4.4e-11 28.9 0.4 1.4 1 REBASE::I-Bth0305I
Domain annotation for each sequence (and alignments):
>> REBASE::I-Bth0305I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.9 0.4 4.4e-11 4.4e-11 38 106 .. 187 256 .. 165 258 .. 0.85
Alignments for each domain:
== domain 1 score: 28.9 bits; conditional E-value: 4.4e-11
DUF559 38 qkpigsYivDfvclkaklivelDGaq.hdee..eeyDaeRtelLeslGftvlRfkndevlknieevleeilk 106
++++ + vDf+ +kl +e++G + h+++ ++D+++ + L+s G++vl +de+ ++i++v ++i+k
REBASE::I-Bth0305I 187 HHVVEGWNVDFYL-GKKLAIEVNGVYwHSKQknVNKDKRKLSELHSKGYRVLTIEDDEL-NDIDKVKQQIQK 256
57899999***96.579*******974666555789**********************9.9*********87 PP
Or compare REBASE::I-Bth0305I to CDD or PaperBLAST