REBASE::YkrI has 289 amino acids
Query: DUF559 [M=109]
Accession: PF04480.16
Description: Protein of unknown function (DUF559)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-09 22.4 0.5 1.1e-08 21.3 0.5 1.5 1 REBASE::YkrI
Domain annotation for each sequence (and alignments):
>> REBASE::YkrI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 21.3 0.5 1.1e-08 1.1e-08 24 106 .. 28 115 .. 4 119 .. 0.76
Alignments for each domain:
== domain 1 score: 21.3 bits; conditional E-value: 1.1e-08
DUF559 24 llrnrrlsglkfrRqkpi....gsYivDfvclkaklivelDGaqhdeeeeyDaeRte.lLeslGftvlRfkndevlknieevleeilk 106
+++ + +++kf q+ + g+ + D + l +e+D h +++e+D+ R++ +++++G++v+R + d l++++e +++ ++
REBASE::YkrI 28 IVHKLNRDDIKFVTQQYVkresGRALTDLYFPAINLHIEIDEPFHLKQAEHDNLREAdIIDATGHEVIRISVDGSLRQMNERIDDCVA 115
44455567899999998834335689***************************9975389***********99999998888777665 PP
Or compare REBASE::YkrI to CDD or PaperBLAST