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Align XP_001351738.1 to PF04480 (DUF559)

XP_001351738.1 has 1379 amino acids

Query:       DUF559  [M=109]
Accession:   PF04480.16
Description: Protein of unknown function (DUF559)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-09   23.4   0.2    1.2e-08   21.1   0.0    2.3  2  XP_001351738.1  


Domain annotation for each sequence (and alignments):
>> XP_001351738.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.19      0.19      17      56 ..     550     589 ..     546     591 .. 0.72
   2 !   21.1   0.0   1.2e-08   1.2e-08       4      86 ..    1254    1346 ..    1252    1350 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.19
          DUF559  17 aekkLWrllrnrrlsglkfrRqkpigsYivDfvclkakli 56 
                     ++  +W+++++++++++   + + i   i  f ++k+ li
  XP_001351738.1 550 KDPDIWKYIKKQFYENINNFKAQEISIIIWSFGSIKNELI 589
                     56679*******9999875555556777777777776665 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 1.2e-08
          DUF559    4 kanarklRreq.teaekkLWrllrn..rrlsglkfrRqkpigsYivDfvclkaklivelDGaqhdee.......eeyDaeRtelLeslGftvl 86  
                      k+ ar+ R+eq t+   ++ +++ n  rrl+ ++++   +++s +vD +  + k+++e+DG +h  +       +++   +++lL +lG+tv+
  XP_001351738.1 1254 KQLARNQRKEQkTHISSSVHKKISNdlRRLNIFHYNEYFILDSILVDIFIPHSKIVIEIDGPNHFFQkgemifyKSNTLFKKRLLRALGYTVI 1346
                      67788888876366778888888874469***********************************87655555555566678899999999997 PP



Or compare XP_001351738.1 to CDD or PaperBLAST