biolip::6zymu has 157 amino acids
Query: Saf4_Yju2 [M=333]
Accession: PF04502.17
Description: Saf4/Yju2 protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-86 276.0 19.7 6.2e-72 229.0 8.6 2.0 2 biolip::6zymu
Domain annotation for each sequence (and alignments):
>> biolip::6zymu
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 229.0 8.6 6.2e-72 6.2e-72 1 101 [. 8 108 .. 8 110 .. 0.99
2 ! 53.9 3.4 1.2e-18 1.2e-18 122 169 .. 109 156 .. 108 157 .] 0.96
Alignments for each domain:
== domain 1 score: 229.0 bits; conditional E-value: 6.2e-72
Saf4_Yju2 1 kYyPPDfDpskiprerarknrqlvvRlmaPfnirCktCgeyIykGkkFNarkekVenetYlgipIfrFyiKCtrClaeiefkTDPkntdYvieeGa 96
kYyPPDfDpskip+ +++k+rq+vvRlmaPfn+rCktCgeyIykGkkFNarke+V+ne Ylg+pIfrFyiKCtrClaei+fkTDP+ntdY++e+Ga
biolip::6zymu 8 KYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGA 103
9*********************************************************************************************** PP
Saf4_Yju2 97 tRnfe 101
tRnf+
biolip::6zymu 104 TRNFQ 108
****8 PP
== domain 2 score: 53.9 bits; conditional E-value: 1.2e-18
Saf4_Yju2 122 aedamkklEkrtkdskkemealesLeeLkelnqrqakvdyeamlelrr 169
+++mk+lE+rtkdsk eme+le+L+eLk+lnqrqa+vd+eaml+++r
biolip::6zymu 109 LNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR 156
69*******************************************986 PP
Or compare biolip::6zymu to CDD or PaperBLAST