SwissProt::Q3ECT8 has 152 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-30 92.6 7.7 1.3e-30 92.3 7.7 1.1 1 SwissProt::Q3ECT8
Domain annotation for each sequence (and alignments):
>> SwissProt::Q3ECT8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 92.3 7.7 1.3e-30 1.3e-30 3 151 .] 8 136 .. 6 136 .. 0.96
Alignments for each domain:
== domain 1 score: 92.3 bits; conditional E-value: 1.3e-30
CASP_dom 3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilD 94
+++a+l+LRl+++vla+ ++++m f++++af+ylv+++++a+ ++l+++++++++++ +++ ++++++l++ i+D
SwissProt::Q3ECT8 8 VGTTASLSLRLGQMVLAFGSLLFMTIGVR------------FYQFTAFCYLVTIMSLAIPWNLTLAMVDIYCVILQQPFQKPRILLAISIGD 87
5789**********************999............*************************************************** PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+v+++l l++as+aa+vv+++++++s+ C cnr++ a+ l+fl+++l
SwissProt::Q3ECT8 88 WVVSVLALASASSAASVVDILRSNESS------CPPTI--CNRYQFAATLAFLTWFL 136
************************888......88666..***************86 PP
Or compare SwissProt::Q3ECT8 to CDD or PaperBLAST