SwissProt::Q9M0L3 has 170 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-39 121.6 16.0 1.7e-39 121.2 16.0 1.1 1 SwissProt::Q9M0L3
Domain annotation for each sequence (and alignments):
>> SwissProt::Q9M0L3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 121.2 16.0 1.7e-39 1.7e-39 7 151 .] 17 155 .. 13 155 .. 0.97
Alignments for each domain:
== domain 1 score: 121.2 bits; conditional E-value: 1.7e-39
CASP_dom 7 aelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvla 98
+++++R+l++ +a+a+++vm+tn++ +v+ i ++ak+s+++afrylv+a++++++ +l++lv+++ +++r + l+++lf++D +++
SwissProt::Q9M0L3 17 VQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFTLVWACLAVRR------RGLVFALFFFDLLTT 102
7899************************************************************9998854......679************ PP
CASP_dom 99 ylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+sA sAa+a y++k+gn++a+Wl+iC ++ +c+rv++++a+sf++f+l
SwissProt::Q9M0L3 103 LTAISAFSAAFAEGYVGKYGNKQAGWLPICGYVHGYCSRVTISLAMSFASFIL 155
***************************************************86 PP
Or compare SwissProt::Q9M0L3 to CDD or PaperBLAST