VIMSS10089712 has 221 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-48 148.5 6.9 8.2e-48 148.2 6.9 1.1 1 VIMSS10089712
Domain annotation for each sequence (and alignments):
>> VIMSS10089712
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 148.2 6.9 8.2e-48 8.2e-48 2 150 .. 57 204 .. 56 205 .. 0.98
Alignments for each domain:
== domain 1 score: 148.2 bits; conditional E-value: 8.2e-48
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
r+++++++vLRl+a+++a+aaa+ mat+++t+++f ++q++a+++dlp+ +v++n+i+ +Y +l+l++s+v+++r + + +l+l+++D+
VIMSS10089712 57 RGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFtqFLQFQADYTDLPTMSSFVIVNSIVGGYLTLSLPFSIVCILR---PLAVPPRLFLILCDT 149
78999************************************************************************9...9999*********** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
v++ l+l AasA+aa+vyla++gns+++Wl++C+qfg+Fc+ +++av++sf+a+
VIMSS10089712 150 VMMGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAAT 204
****************************************************986 PP
Or compare VIMSS10089712 to CDD or PaperBLAST