VIMSS10089823 has 179 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-34 104.6 14.4 2.5e-34 104.4 14.4 1.1 1 VIMSS10089823
Domain annotation for each sequence (and alignments):
>> VIMSS10089823
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 104.4 14.4 2.5e-34 2.5e-34 2 151 .] 35 164 .. 34 164 .. 0.95
Alignments for each domain:
== domain 1 score: 104.4 bits; conditional E-value: 2.5e-34
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvl 97
++++l++l+LR++++++a+aa++vma++++ f +++af+ylv+a ++++++sl++++++v+++++k+s+++++l++l++i+D v+
VIMSS10089823 35 MPGTLLGLALRFFQFLFAAAALCVMASTSD------------FPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVT 118
678999************************............****************************************************** PP
CASP_dom 98 aylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
++l+++Aa+A+a+++ l+ ++ + C q++ c ++++++al+f+++++
VIMSS10089823 119 STLTFAAACASAGITVLID-NDLN-----SCAQNH--CVQFETSTALAFISWFA 164
***************6665.5555.....8*****..***************85 PP
Or compare VIMSS10089823 to CDD or PaperBLAST