VIMSS10090730 has 206 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-50 155.2 8.9 7.6e-50 154.8 8.9 1.2 1 VIMSS10090730
Domain annotation for each sequence (and alignments):
>> VIMSS10090730
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 154.8 8.9 7.6e-50 7.6e-50 2 150 .. 43 190 .. 42 191 .. 0.98
Alignments for each domain:
== domain 1 score: 154.8 bits; conditional E-value: 7.6e-50
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
r+l++++++LRl+a+++++ aa+vm t+++t+++f ++q++a ++dlpaf+y+v+a a++a Y +l+l++s+vs+vr +++ a +l+l+i+D+
VIMSS10090730 43 RGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFtqFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVR---PHAVAPRLILLICDT 135
78899************************************************************************9...*************** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
++++l +sAa+Aaa+++yla++gn++++Wl+iC+qfg+Fc++v++av++ +a+l
VIMSS10090730 136 LVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAIL 190
*************************************************999987 PP
Or compare VIMSS10090730 to CDD or PaperBLAST