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Align VIMSS10091117 to PF04535 (CASP_dom)

VIMSS10091117 has 178 amino acids

Query:       CASP_dom  [M=151]
Accession:   PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-27   80.9   5.4    5.4e-27   80.6   5.4    1.1  1  VIMSS10091117  


Domain annotation for each sequence (and alignments):
>> VIMSS10091117  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   5.4   5.4e-27   5.4e-27       4     150 ..      13     157 ..      10     158 .. 0.94

  Alignments for each domain:
  == domain 1  score: 80.6 bits;  conditional E-value: 5.4e-27
       CASP_dom   4 lrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvlay 99 
                    lr++ l+LR+l++++ l+++v++ tn+ t+e+++++ k  f+d+ a+ry++ a++i  vY+++ql+l++ +++++k++       ++f +D v++y
  VIMSS10091117  13 LRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL--TYQFDFYGDKVISY 106
                    78999********************************************************************9875555..89************ PP

       CASP_dom 100 lllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
                    ll+++++A ++v++ +k+   ++   +  + ++kF+++  a+++l ++af+
  VIMSS10091117 107 LLATGSAAGFGVSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFV 157
                    ****************999777777778999******************97 PP



Or compare VIMSS10091117 to CDD or PaperBLAST