VIMSS10091117 has 178 amino acids
Query: CASP_dom [M=151] Accession: PF04535.16 Description: Casparian strip membrane protein domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.4e-27 80.9 5.4 5.4e-27 80.6 5.4 1.1 1 VIMSS10091117 Domain annotation for each sequence (and alignments): >> VIMSS10091117 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 80.6 5.4 5.4e-27 5.4e-27 4 150 .. 13 157 .. 10 158 .. 0.94 Alignments for each domain: == domain 1 score: 80.6 bits; conditional E-value: 5.4e-27 CASP_dom 4 lrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvlay 99 lr++ l+LR+l++++ l+++v++ tn+ t+e+++++ k f+d+ a+ry++ a++i vY+++ql+l++ +++++k++ ++f +D v++y VIMSS10091117 13 LRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL--TYQFDFYGDKVISY 106 78999********************************************************************9875555..89************ PP CASP_dom 100 lllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150 ll+++++A ++v++ +k+ ++ + + ++kF+++ a+++l ++af+ VIMSS10091117 107 LLATGSAAGFGVSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFV 157 ****************999777777778999******************97 PP
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