VIMSS10093654 has 178 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-37 114.5 12.1 2.5e-37 114.1 12.1 1.2 1 VIMSS10093654
Domain annotation for each sequence (and alignments):
>> VIMSS10093654
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.1 12.1 2.5e-37 2.5e-37 3 150 .. 19 158 .. 17 171 .. 0.95
Alignments for each domain:
== domain 1 score: 114.1 bits; conditional E-value: 2.5e-37
CASP_dom 3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvla 98
+ ++ae vLR++ ++l+++ +v+m+ n+ ++e+ +++++s++ af+ylv an+++a+Ysll++++ ++ sk ++ +lf+lDqv++
VIMSS10093654 19 TEKSAEAVLRVASMALSITGLVIMIKNSISNEF----GSVSYSNIGAFMYLVSANGVCAAYSLLSALAILALP----CPISKVQVRTLFLLDQVVT 106
67899****************************....8****************************9966544....48999************** PP
CASP_dom 99 ylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
y++l+A + +a+ vyla++gn ++W+++C+++g+Fc+++ ++v+++f+ +l
VIMSS10093654 107 YVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCHNALISVVFTFVVSL 158
************************************************9876 PP
Or compare VIMSS10093654 to CDD or PaperBLAST