VIMSS10100573 has 208 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-28 83.5 6.1 9.2e-28 83.1 6.1 1.2 1 VIMSS10100573
Domain annotation for each sequence (and alignments):
>> VIMSS10100573
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.1 6.1 9.2e-28 9.2e-28 3 151 .] 51 190 .. 49 190 .. 0.93
Alignments for each domain:
== domain 1 score: 83.1 bits; conditional E-value: 9.2e-28
CASP_dom 3 klrlaelvLRllalvlalaaavvmatnkqtkevf.kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkk.serskalalllfilDqv 96
++++++lvLR++++vl++++a+ +a+n q+ + +q + +f ++p++ y++++++i +vY+ lq++ v+ ++++ +++ + ++ fi+Dqv
VIMSS10100573 51 SVHVIGLVLRFITMVLCFVSALSLAVNVQRPSKRhLTQNSSSFASYPELLYCFGVAVIGFVYTSLQTFKGVCDITHRGvLISEPLSDYISFIFDQV 146
7899*************************98888999*************************************9988855566699********* PP
CASP_dom 97 laylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
++yll+s++s a+a+ + +++ + ++ n+ ++v++sf afl+
VIMSS10100573 147 ICYLLVSSSSVAIAWIQHINED-----------AIKTLRNNSIVSVSMSFSAFLV 190
****************998655...........8999***************985 PP
Or compare VIMSS10100573 to CDD or PaperBLAST