VIMSS10104547 has 202 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-50 155.7 10.1 4.9e-50 155.4 10.1 1.1 1 VIMSS10104547
Domain annotation for each sequence (and alignments):
>> VIMSS10104547
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.4 10.1 4.9e-50 4.9e-50 2 150 .. 39 186 .. 38 187 .. 0.98
Alignments for each domain:
== domain 1 score: 155.4 bits; conditional E-value: 4.9e-50
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
r+l++++++LRl+a+v+alaaa+ m+t+++t+++f ++q++a+++dlp+f+++vva ai+a+Y +l+l++svv +vr + + a +lll++lD+
VIMSS10104547 39 RGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFtqFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVR---PLAVAPRLLLLVLDT 131
78999************************************************************************9...9999*********** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
+ ++l ++AasAaaa+vyla++gn++++Wl+iC+qfg+Fc+++++av+ +f+++
VIMSS10104547 132 AALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVT 186
***************************************************9986 PP
Or compare VIMSS10104547 to CDD or PaperBLAST